AT3G54010 (DEI1, PAS1)


Aliases : DEI1, PAS1

Description : FKBP-type peptidyl-prolyl cis-trans isomerase family protein


Gene families : OG0006894 (Archaeplastida) Phylogenetic Tree(s): OG0006894_tree ,
OG_05_0007504 (LandPlants) Phylogenetic Tree(s): OG_05_0007504_tree ,
OG_06_0008849 (SeedPlants) Phylogenetic Tree(s): OG_06_0008849_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54010
Cluster HCCA: Cluster_193

Target Alias Description ECC score Gene Family Method Actions
Solyc11g011420.3.1 No alias protein folding catalyst (FKBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization RCA Interproscan
BP GO:0000413 protein peptidyl-prolyl isomerization IBA Interproscan
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity ISS Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IBA Interproscan
MF GO:0005515 protein binding IPI Interproscan
MF GO:0005528 FK506 binding ISS Interproscan
MF GO:0005528 FK506 binding IBA Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0009735 response to cytokinin IMP Interproscan
BP GO:0009826 unidimensional cell growth IMP Interproscan
BP GO:0009880 embryonic pattern specification IMP Interproscan
BP GO:0010048 vernalization response RCA Interproscan
CC GO:0016020 membrane IBA Interproscan
BP GO:0018208 peptidyl-proline modification IBA Interproscan
BP GO:0030010 establishment of cell polarity IMP Interproscan
BP GO:0030154 cell differentiation IMP Interproscan
BP GO:0042761 very long-chain fatty acid biosynthetic process IMP Interproscan
BP GO:0048364 root development IMP Interproscan
BP GO:0048527 lateral root development IMP Interproscan
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004057 arginyltransferase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
MF GO:0005484 SNAP receptor activity IEP Neighborhood
CC GO:0005654 nucleoplasm IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
CC GO:0005802 trans-Golgi network IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006301 postreplication repair IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009742 brassinosteroid mediated signaling pathway IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
BP GO:0009909 regulation of flower development IEP Neighborhood
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010638 positive regulation of organelle organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
BP GO:0016598 protein arginylation IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
CC GO:0031306 intrinsic component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031307 integral component of mitochondrial outer membrane IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
CC GO:0032592 integral component of mitochondrial membrane IEP Neighborhood
BP GO:0032784 regulation of DNA-templated transcription, elongation IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0043401 steroid hormone mediated signaling pathway IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0045489 pectin biosynthetic process IEP Neighborhood
BP GO:0048358 mucilage pectin biosynthetic process IEP Neighborhood
BP GO:0048363 mucilage pectin metabolic process IEP Neighborhood
BP GO:0048367 shoot system development IEP Neighborhood
BP GO:0048438 floral whorl development IEP Neighborhood
BP GO:0048467 gynoecium development IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048731 system development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0050994 regulation of lipid catabolic process IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000241 regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 176 256
IPR001179 PPIase_FKBP_dom 291 380
IPR001179 PPIase_FKBP_dom 46 144
IPR019734 TPR_repeat 486 509
No external refs found!