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  5. Zm00001e039245_P001

Zm00001e039245_P001


Description : component RPS16 of SSU proteome


Gene families : OG0002343 (Archaeplastida) Phylogenetic Tree(s): OG0002343_tree ,
OG_05_0002210 (LandPlants) Phylogenetic Tree(s): OG_05_0002210_tree ,
OG_06_0002828 (SeedPlants) Phylogenetic Tree(s): OG_06_0002828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039245_P001
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00161540 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AMTR_s00046p00076360 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 Archaeplastida
AT2G09990 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.05 Archaeplastida
Cre13.g573351 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
GSVIVT01017923001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 Archaeplastida
Gb_05712 No alias component RPS16 of SSU proteome 0.02 Archaeplastida
LOC_Os11g03400.1 No alias component RPS16 of SSU proteome 0.08 Archaeplastida
LOC_Os12g03090.1 No alias component RPS16 of SSU proteome 0.08 Archaeplastida
MA_32670g0010 No alias component RPS16 of SSU proteome 0.04 Archaeplastida
Mp1g07720.1 No alias component RPS16 of SSU proteome 0.03 Archaeplastida
Mp1g14290.1 No alias component RPS16 of SSU proteome 0.03 Archaeplastida
Pp3c18_1350V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Archaeplastida
Pp3c19_22410V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Archaeplastida
Pp3c21_20630V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.03 Archaeplastida
Pp3c22_21090V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.02 Archaeplastida
Pp3c9_4180V3.1 No alias Ribosomal protein S5 domain 2-like superfamily protein 0.06 Archaeplastida
Smo138369 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
Solyc01g068530.3.1 No alias component RPS16 of SSU proteome 0.03 Archaeplastida
Solyc04g026100.1.1 No alias component RPS16 of SSU proteome 0.02 Archaeplastida
Solyc05g005690.1.1 No alias component RPS16 of SSU proteome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000754 Ribosomal_S9 17 149
No external refs found!