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  5. Zm00001e039357_P001

Zm00001e039357_P001


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0070820 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0064811 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039357_P001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00004p00252760 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.03 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G16720 ATL2, TL2 TOXICOS EN LEVADURA 2 0.03 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.01 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.01 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_04642 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20461 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_28932 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_39473 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g14990.1 No alias no hits & (original description: none) 0.01 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g29600.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
MA_111727g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_177169g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c14_22300V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.01 Archaeplastida
Solyc02g083400.3.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g083460.3.1 No alias RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.01 Archaeplastida
Solyc03g115465.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc11g010330.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e022538_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 103 146
No external refs found!