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  5. Zm00001e039401_P001

Zm00001e039401_P001


Description : transcription factor (OFP)


Gene families : OG0000130 (Archaeplastida) Phylogenetic Tree(s): OG0000130_tree ,
OG_05_0000050 (LandPlants) Phylogenetic Tree(s): OG_05_0000050_tree ,
OG_06_0014113 (SeedPlants) Phylogenetic Tree(s): OG_06_0014113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039401_P001
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00212750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.03 Archaeplastida
AMTR_s00078p00189070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AMTR_s00103p00131630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
AMTR_s00109p00024120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
AT2G18500 ATOFP7, OFP7 ovate family protein 7 0.03 Archaeplastida
AT2G30400 OFP2, ATOFP2 ovate family protein 2 0.02 Archaeplastida
AT2G36026 No alias Ovate family protein 0.02 Archaeplastida
AT3G52525 ATOFP6, OFP6 ovate family protein 6 0.02 Archaeplastida
GSVIVT01017105001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
GSVIVT01024579001 No alias No description available 0.02 Archaeplastida
GSVIVT01030204001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
GSVIVT01034649001 No alias RNA biosynthesis.transcriptional activation.OFP... 0.04 Archaeplastida
LOC_Os01g12690.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os01g64430.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os02g45620.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os03g06350.1 No alias transcription factor (OFP) 0.04 Archaeplastida
LOC_Os04g33870.1 No alias transcription factor (OFP) 0.02 Archaeplastida
LOC_Os04g37510.1 No alias transcription factor (OFP) 0.05 Archaeplastida
LOC_Os04g48830.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os04g58820.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g25910.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36970.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g36990.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os05g44090.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os08g01190.1 No alias transcription factor (OFP) 0.03 Archaeplastida
LOC_Os10g38880.1 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_10434319g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
MA_134006g0010 No alias transcription factor (OFP) 0.04 Archaeplastida
MA_2468787g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_61037g0010 No alias transcription factor (OFP) 0.02 Archaeplastida
Smo69626 No alias RNA biosynthesis.transcriptional activation.OFP... 0.02 Archaeplastida
Solyc03g034100.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g074020.2.1 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e000190_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e000779_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e007176_P001 No alias transcription factor (OFP) 0.04 Archaeplastida
Zm00001e015439_P001 No alias transcription factor (OFP) 0.02 Archaeplastida
Zm00001e032149_P001 No alias transcription factor (OFP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006458 Ovate_C 187 243
No external refs found!