Zm00001e039468_P001

Description : no hits & (original description: none)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0069165 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0063036 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e039468_P001
Cluster	HCCA: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00242860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00039p00112210	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00056p00080350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00155p00085360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AT3G20750	GATA29	GATA transcription factor 29	0.04	Archaeplastida
AT4G32890	GATA9	GATA transcription factor 9	0.01	Archaeplastida
AT5G26930	GATA23	GATA transcription factor 23	0.03	Archaeplastida
GSVIVT01018833001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
GSVIVT01035614001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
Gb_24639	No alias	transcription factor (GATA)	0.01	Archaeplastida
Gb_25568	No alias	transcription factor (GATA)	0.04	Archaeplastida
Gb_34837	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os01g54210.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os02g12790.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os02g56250.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os03g05160.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os10g32070.1	No alias	transcription factor (GATA)	0.09	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os12g07120.1	No alias	transcription factor (GATA)	0.11	Archaeplastida
MA_44185g0010	No alias	transcription factor (GATA)	0.03	Archaeplastida
MA_92522g0010	No alias	transcription factor (GATA)	0.03	Archaeplastida
Pp3c10_22480V3.1	No alias	GATA transcription factor 9	0.02	Archaeplastida
Pp3c22_11040V3.1	No alias	GATA transcription factor 19	0.02	Archaeplastida
Pp3c3_25840V3.1	No alias	No annotation	0.01	Archaeplastida
Solyc01g060490.4.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc04g015360.3.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc06g075140.3.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e014466_P002	No alias	transcription factor (GATA)	0.01	Archaeplastida
Zm00001e020243_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e027439_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida
Zm00001e037876_P002	No alias	transcription factor (GATA)	0.04	Archaeplastida
Zm00001e038971_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Neighborhood
MF	GO:0004427	inorganic diphosphatase activity	IEP	Neighborhood
BP	GO:0006551	leucine metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009098	leucine biosynthetic process	IEP	Neighborhood
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	112	142

External Links

No external refs found!

Zm00001e039468_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation