Zm00001e039469_P001

Description : transcription factor (GATA)

Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0068885 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0062732 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e039469_P001
Cluster	HCCA: Cluster_228

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00242860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00039p00112210	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00056p00080350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00155p00085360	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AT2G28340	GATA13	GATA transcription factor 13	0.03	Archaeplastida
AT3G20750	GATA29	GATA transcription factor 29	0.04	Archaeplastida
AT5G26930	GATA23	GATA transcription factor 23	0.03	Archaeplastida
Gb_25568	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os01g54210.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os02g12790.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os02g56250.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
LOC_Os03g05160.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os10g32070.1	No alias	transcription factor (GATA)	0.07	Archaeplastida
LOC_Os10g40810.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
LOC_Os12g07120.1	No alias	transcription factor (GATA)	0.09	Archaeplastida
LOC_Os12g42970.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
MA_92522g0010	No alias	transcription factor (GATA)	0.03	Archaeplastida
Pp3c10_22480V3.1	No alias	GATA transcription factor 9	0.02	Archaeplastida
Pp3c22_11040V3.1	No alias	GATA transcription factor 19	0.02	Archaeplastida
Pp3c3_25840V3.1	No alias	No annotation	0.01	Archaeplastida
Solyc01g060490.4.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc04g015360.3.1	No alias	transcription factor (GATA)	0.03	Archaeplastida
Solyc10g018560.2.1	No alias	transcription factor (GATA)	0.02	Archaeplastida
Zm00001e014466_P002	No alias	transcription factor (GATA)	0.01	Archaeplastida
Zm00001e020243_P001	No alias	transcription factor (GATA)	0.04	Archaeplastida
Zm00001e037876_P002	No alias	transcription factor (GATA)	0.04	Archaeplastida
Zm00001e038971_P001	No alias	transcription factor (GATA)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003852	2-isopropylmalate synthase activity	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006551	leucine metabolic process	IEP	Neighborhood
BP	GO:0006720	isoprenoid metabolic process	IEP	Neighborhood
BP	GO:0008299	isoprenoid biosynthetic process	IEP	Neighborhood
BP	GO:0009081	branched-chain amino acid metabolic process	IEP	Neighborhood
BP	GO:0009082	branched-chain amino acid biosynthetic process	IEP	Neighborhood
BP	GO:0009098	leucine biosynthetic process	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Neighborhood
MF	GO:0046912	transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000679	Znf_GATA	309	342
IPR000679	Znf_GATA	147	180

External Links

No external refs found!

Zm00001e039469_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation