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  5. AT3G54360

AT3G54360


Description : zinc ion binding


Gene families : OG0006244 (Archaeplastida) Phylogenetic Tree(s): OG0006244_tree ,
OG_05_0007598 (LandPlants) Phylogenetic Tree(s): OG_05_0007598_tree ,
OG_06_0009031 (SeedPlants) Phylogenetic Tree(s): OG_06_0009031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54360
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00030390 evm_27.TU.AmTr_v1... Protein NCA1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00119p00032590 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
Cpa|evm.model.tig00001155.24 No alias Protein NCA1 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os01g01420.2 No alias Protein NCA1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g55200.1 No alias Protein NCA1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc10g080520.3.1 No alias Protein NCA1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:1902553 positive regulation of catalase activity IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000304 response to singlet oxygen IEP Neighborhood
MF GO:0003756 protein disulfide isomerase activity IEP Neighborhood
MF GO:0004176 ATP-dependent peptidase activity IEP Neighborhood
MF GO:0004329 formate-tetrahydrofolate ligase activity IEP Neighborhood
MF GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity IEP Neighborhood
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
CC GO:0005778 peroxisomal membrane IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
CC GO:0005782 peroxisomal matrix IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0006000 fructose metabolic process IEP Neighborhood
BP GO:0006002 fructose 6-phosphate metabolic process IEP Neighborhood
BP GO:0006003 fructose 2,6-bisphosphate metabolic process IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006515 protein quality control for misfolded or incompletely synthesized proteins IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006874 cellular calcium ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007584 response to nutrient IEP Neighborhood
BP GO:0007623 circadian rhythm IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009528 plastid inner membrane IEP Neighborhood
CC GO:0009535 chloroplast thylakoid membrane IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009657 plastid organization IEP Neighborhood
BP GO:0009658 chloroplast organization IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0009704 de-etiolation IEP Neighborhood
CC GO:0009706 chloroplast inner membrane IEP Neighborhood
BP GO:0009735 response to cytokinin IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009882 blue light photoreceptor activity IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0009902 chloroplast relocation IEP Neighborhood
BP GO:0009903 chloroplast avoidance movement IEP Neighborhood
BP GO:0009904 chloroplast accumulation movement IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010075 regulation of meristem growth IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010190 cytochrome b6f complex assembly IEP Neighborhood
BP GO:0010304 PSII associated light-harvesting complex II catabolic process IEP Neighborhood
BP GO:0010322 regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP Neighborhood
BP GO:0010343 singlet oxygen-mediated programmed cell death IEP Neighborhood
BP GO:0010360 negative regulation of anion channel activity IEP Neighborhood
BP GO:0010361 regulation of anion channel activity by blue light IEP Neighborhood
BP GO:0010362 negative regulation of anion channel activity by blue light IEP Neighborhood
BP GO:0010380 regulation of chlorophyll biosynthetic process IEP Neighborhood
BP GO:0010422 regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010423 negative regulation of brassinosteroid biosynthetic process IEP Neighborhood
BP GO:0010600 regulation of auxin biosynthetic process IEP Neighborhood
BP GO:0010617 circadian regulation of calcium ion oscillation IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0010894 negative regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0012501 programmed cell death IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
BP GO:0016560 protein import into peroxisome matrix, docking IEP Neighborhood
MF GO:0016688 L-ascorbate peroxidase activity IEP Neighborhood
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
BP GO:0019216 regulation of lipid metabolic process IEP Neighborhood
BP GO:0019218 regulation of steroid metabolic process IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019747 regulation of isoprenoid metabolic process IEP Neighborhood
BP GO:0019750 chloroplast localization IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
CC GO:0031897 Tic complex IEP Neighborhood
CC GO:0031903 microbody membrane IEP Neighborhood
CC GO:0031907 microbody lumen IEP Neighborhood
CC GO:0031969 chloroplast membrane IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032350 regulation of hormone metabolic process IEP Neighborhood
BP GO:0032351 negative regulation of hormone metabolic process IEP Neighborhood
BP GO:0032353 negative regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0032410 negative regulation of transporter activity IEP Neighborhood
BP GO:0032413 negative regulation of ion transmembrane transporter activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034763 negative regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0034766 negative regulation of ion transmembrane transport IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036473 cell death in response to oxidative stress IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0042170 plastid membrane IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0042793 plastid transcription IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043271 negative regulation of ion transport IEP Neighborhood
BP GO:0043609 regulation of carbon utilization IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044257 cellular protein catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
BP GO:0045036 protein targeting to chloroplast IEP Neighborhood
BP GO:0045037 protein import into chloroplast stroma IEP Neighborhood
BP GO:0045038 protein import into chloroplast thylakoid membrane IEP Neighborhood
BP GO:0045833 negative regulation of lipid metabolic process IEP Neighborhood
BP GO:0045939 negative regulation of steroid metabolic process IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046474 glycerophospholipid biosynthetic process IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0046885 regulation of hormone biosynthetic process IEP Neighborhood
BP GO:0046890 regulation of lipid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048511 rhythmic process IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0050810 regulation of steroid biosynthetic process IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051051 negative regulation of transport IEP Neighborhood
BP GO:0051055 negative regulation of lipid biosynthetic process IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051193 regulation of cofactor metabolic process IEP Neighborhood
BP GO:0051480 regulation of cytosolic calcium ion concentration IEP Neighborhood
BP GO:0051640 organelle localization IEP Neighborhood
BP GO:0051644 plastid localization IEP Neighborhood
BP GO:0051656 establishment of organelle localization IEP Neighborhood
BP GO:0051667 establishment of plastid localization IEP Neighborhood
CC GO:0055035 plastid thylakoid membrane IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055074 calcium ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0061077 chaperone-mediated protein folding IEP Neighborhood
BP GO:0065002 intracellular protein transmembrane transport IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071071 regulation of phospholipid biosynthetic process IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0071806 protein transmembrane transport IEP Neighborhood
BP GO:0072503 cellular divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072507 divalent inorganic cation homeostasis IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072596 establishment of protein localization to chloroplast IEP Neighborhood
BP GO:0072598 protein localization to chloroplast IEP Neighborhood
BP GO:0090030 regulation of steroid hormone biosynthetic process IEP Neighborhood
BP GO:0090032 negative regulation of steroid hormone biosynthetic process IEP Neighborhood
BP GO:0090056 regulation of chlorophyll metabolic process IEP Neighborhood
BP GO:0090342 regulation of cell aging IEP Neighborhood
BP GO:0090354 regulation of auxin metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097468 programmed cell death in response to reactive oxygen species IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP Neighborhood
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902395 regulation of 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:1903725 regulation of phospholipid metabolic process IEP Neighborhood
BP GO:1903792 negative regulation of anion transport IEP Neighborhood
BP GO:1903960 negative regulation of anion transmembrane transport IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!