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  5. Zm00001e039674_P002

Zm00001e039674_P002


Description : Probable polygalacturonase OS=Vitis vinifera (sp|a7pzl3|pglr_vitvi : 415.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 41.9)


Gene families : OG0000349 (Archaeplastida) Phylogenetic Tree(s): OG0000349_tree ,
OG_05_0000329 (LandPlants) Phylogenetic Tree(s): OG_05_0000329_tree ,
OG_06_0001972 (SeedPlants) Phylogenetic Tree(s): OG_06_0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e039674_P002
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G23900 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
AT5G41870 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01015044001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01019516001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.02 Archaeplastida
GSVIVT01028057001 No alias Probable polygalacturonase OS=Vitis vinifera 0.04 Archaeplastida
Gb_23151 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Gb_23153 No alias Probable polygalacturonase OS=Vitis vinifera... 0.03 Archaeplastida
Gb_39001 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
LOC_Os02g15690.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
LOC_Os05g50960.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida
LOC_Os12g36810.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.05 Archaeplastida
Pp3c6_7160V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Solyc06g009790.4.1 No alias Probable polygalacturonase OS=Vitis vinifera... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005484 SNAP receptor activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 136 420
No external refs found!