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AT3G54550


Description : Protein of unknown function (DUF506)


Gene families : OG0000196 (Archaeplastida) Phylogenetic Tree(s): OG0000196_tree ,
OG_05_0000095 (LandPlants) Phylogenetic Tree(s): OG_05_0000095_tree ,
OG_06_0002130 (SeedPlants) Phylogenetic Tree(s): OG_06_0002130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G54550
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
Gb_30160 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g48850.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g58230.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_13827g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c15_18400V3.1 No alias Protein of unknown function (DUF506) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003883 CTP synthase activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0009299 mRNA transcription IEP Neighborhood
CC GO:0031350 intrinsic component of plastid membrane IEP Neighborhood
CC GO:0031351 integral component of plastid membrane IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 62 271
No external refs found!