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Description : Beta-carotene isomerase D27, chloroplastic OS=Arabidopsis thaliana (sp|q7xa78|d27_arath : 110.0)
Gene families : OG0001228 (Archaeplastida) Phylogenetic Tree(s): OG0001228_tree ,
OG_05_0008279 (LandPlants) Phylogenetic Tree(s): OG_05_0008279_tree ,
OG_06_0009788 (SeedPlants) Phylogenetic Tree(s): OG_06_0009788_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e040329_P004 | |
| Cluster | HCCA: Cluster_319 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G64680 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.03 | Archaeplastida | |
| AT4G01995 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.07 | Archaeplastida | |
| LOC_Os05g04070.1 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.02 | Archaeplastida | |
| LOC_Os08g02210.2 | No alias | Beta-carotene isomerase D27, chloroplastic... | 0.04 | Archaeplastida | |
| MA_167711g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_18999g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Mp6g03970.1 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.03 | Archaeplastida | |
| Pp3c26_11090V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc08g008630.4.1 | No alias | Beta-carotene isomerase D27, chloroplastic OS=Oryza... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003690 | double-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Neighborhood |
| MF | GO:0004359 | glutaminase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Neighborhood |
| BP | GO:0006766 | vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Neighborhood |
| BP | GO:0008033 | tRNA processing | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Neighborhood |
| BP | GO:0009110 | vitamin biosynthetic process | IEP | Neighborhood |
| MF | GO:0009975 | cyclase activity | IEP | Neighborhood |
| MF | GO:0009976 | tocopherol cyclase activity | IEP | Neighborhood |
| BP | GO:0016052 | carbohydrate catabolic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| MF | GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors | IEP | Neighborhood |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Neighborhood |
| MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Neighborhood |
| MF | GO:0017150 | tRNA dihydrouridine synthase activity | IEP | Neighborhood |
| MF | GO:0019842 | vitamin binding | IEP | Neighborhood |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | Neighborhood |
| BP | GO:0034470 | ncRNA processing | IEP | Neighborhood |
| BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Neighborhood |
| BP | GO:0042816 | vitamin B6 metabolic process | IEP | Neighborhood |
| BP | GO:0042819 | vitamin B6 biosynthetic process | IEP | Neighborhood |
| BP | GO:0042822 | pyridoxal phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0042823 | pyridoxal phosphate biosynthetic process | IEP | Neighborhood |
| BP | GO:0046184 | aldehyde biosynthetic process | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0050662 | coenzyme binding | IEP | Neighborhood |
| MF | GO:0070279 | vitamin B6 binding | IEP | Neighborhood |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | Neighborhood |
| BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025114 | DUF4033 | 159 | 240 |
| No external refs found! |