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  5. Zm00001e040365_P001

Zm00001e040365_P001


Description : Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana (sp|q9s9v9|fbl23_arath : 158.0)


Gene families : OG0000331 (Archaeplastida) Phylogenetic Tree(s): OG0000331_tree ,
OG_05_0000701 (LandPlants) Phylogenetic Tree(s): OG_05_0000701_tree ,
OG_06_0000556 (SeedPlants) Phylogenetic Tree(s): OG_06_0000556_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040365_P001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Solyc08g013780.1.1 No alias Putative F-box/LRR-repeat protein 23 OS=Arabidopsis... 0.03 Archaeplastida
Solyc08g013790.2.1 No alias F-box protein SKIP19 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 247 267
IPR001810 F-box_dom 22 67
No external refs found!