Description : Uncharacterized CRM domain-containing protein At3g25440, chloroplastic OS=Arabidopsis thaliana (sp|q67xl4|y3544_arath : 104.0)
Gene families : OG0001381 (Archaeplastida) Phylogenetic Tree(s): OG0001381_tree ,
OG_05_0000914 (LandPlants) Phylogenetic Tree(s): OG_05_0000914_tree ,
OG_06_0005833 (SeedPlants) Phylogenetic Tree(s): OG_06_0005833_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e040411_P001 | |
Cluster | HCCA: Cluster_216 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00049p00218010 | evm_27.TU.AmTr_v1... | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | Archaeplastida | |
AT3G27550 | No alias | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.03 | Archaeplastida | |
Gb_20452 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | Archaeplastida | |
LOC_Os05g05300.1 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.07 | Archaeplastida | |
MA_10225405g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_10427237g0020 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.02 | Archaeplastida | |
Pp3c3_29500V3.1 | No alias | RNA-binding CRS1 / YhbY (CRM) domain protein | 0.03 | Archaeplastida | |
Solyc06g082990.4.1 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.04 | Archaeplastida | |
Solyc07g047900.3.1 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.03 | Archaeplastida | |
Solyc09g005270.3.1 | No alias | Uncharacterized CRM domain-containing protein At3g25440,... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003724 | RNA helicase activity | IEP | Neighborhood |
MF | GO:0003725 | double-stranded RNA binding | IEP | Neighborhood |
MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
CC | GO:0005643 | nuclear pore | IEP | Neighborhood |
CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | Neighborhood |
CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
CC | GO:0044428 | nuclear part | IEP | Neighborhood |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | Neighborhood |
CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001890 | RNA-binding_CRM | 136 | 220 |
No external refs found! |