1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e040578_P001

Zm00001e040578_P001


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0000028 (LandPlants) Phylogenetic Tree(s): OG_05_0000028_tree ,
OG_06_0000041 (SeedPlants) Phylogenetic Tree(s): OG_06_0000041_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040578_P001
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
AMTR_s00010p00264980 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G20190 ATEXPA11, ATHEXP... expansin 11 0.02 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.07 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.02 Archaeplastida
AT2G40610 EXPA8, ATHEXP... expansin A8 0.02 Archaeplastida
AT3G15370 ATHEXP ALPHA... expansin 12 0.04 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.03 Archaeplastida
AT4G38210 ATEXPA20,... expansin A20 0.06 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.05 Archaeplastida
AT5G39260 EXPA21, EXP21,... expansin A21 0.04 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.03 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.02 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.03 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01016525001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
GSVIVT01030191001 No alias Expansin-A8 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Gb_07436 No alias Expansin-A4 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Gb_13985 No alias alpha-class expansin 0.02 Archaeplastida
Gb_28036 No alias Expansin-A29 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os01g16770.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os02g16800.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06000.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os03g06010.1 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os03g06020.1 No alias alpha-class expansin 0.07 Archaeplastida
LOC_Os03g06040.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.08 Archaeplastida
LOC_Os05g19570.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os05g19600.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os05g39990.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.06 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.04 Archaeplastida
MA_10020g0010 No alias alpha-class expansin 0.06 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_10433559g0020 No alias alpha-class expansin 0.04 Archaeplastida
MA_114349g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_200461g0010 No alias Expansin-A8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_30127g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_35592g0020 No alias alpha-class expansin 0.05 Archaeplastida
MA_3618g0010 No alias Expansin-A15 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_36587g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.05 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.06 Archaeplastida
MA_474624g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_51645g0010 No alias Expansin-A1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8784268g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_915221g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g06900.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g12280.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g22690.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c13_20360V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.02 Archaeplastida
Pp3c20_5780V3.1 No alias expansin A15 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.04 Archaeplastida
Smo102623 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo174522 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Smo231226 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.09 Archaeplastida
Smo409954 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
Smo91129 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Solyc02g088100.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc04g081870.4.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.08 Archaeplastida
Solyc06g005560.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc09g010860.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.1 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004720_P001 No alias alpha-class expansin 0.02 Archaeplastida
Zm00001e014247_P001 No alias Expansin-A23 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Zm00001e017334_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 70 158
IPR007117 Expansin_CBD 169 246
No external refs found!