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  5. Zm00001e040612_P001

Zm00001e040612_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040612_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00181650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.08 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AMTR_s00150p00049910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.03 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.15 Archaeplastida
AT1G68480 JAG C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.03 Archaeplastida
AT2G42410 ZFP11, ATZFP11 zinc finger protein 11 0.07 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.03 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G06070 RAB, RBE C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G06650 GIS2 C2H2 and C2HC zinc fingers superfamily protein 0.08 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.02 Archaeplastida
AT5G48890 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.02 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01011890001 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.07 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01016493001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.06 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os02g01090.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g57550.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57240.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os04g36650.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os08g17640.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os12g42250.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_110160g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_48488g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Solyc01g005130.2.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc01g060420.2.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc05g009380.4.1 No alias Zinc finger protein JAGGED OS=Arabidopsis thaliana... 0.09 Archaeplastida
Solyc07g006880.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Solyc09g061870.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc10g080600.3.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e000996_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e013845_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!