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  5. Zm00001e040752_P001

Zm00001e040752_P001


Description : transcription factor (CAMTA)


Gene families : OG0000551 (Archaeplastida) Phylogenetic Tree(s): OG0000551_tree ,
OG_05_0000809 (LandPlants) Phylogenetic Tree(s): OG_05_0000809_tree ,
OG_06_0003865 (SeedPlants) Phylogenetic Tree(s): OG_06_0003865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e040752_P001
Cluster HCCA: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00173360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.CAMTA... 0.02 Archaeplastida
LOC_Os01g69910.1 No alias transcription factor (CAMTA) 0.03 Archaeplastida
Pp3c3_35530V3.1 No alias signal responsive 1 0.03 Archaeplastida
Solyc12g035520.3.1 No alias transcription factor (CAMTA) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002909 IPT_dom 422 494
IPR005559 CG-1_dom 13 126
IPR000048 IQ_motif_EF-hand-BS 853 873
IPR000048 IQ_motif_EF-hand-BS 831 849
IPR020683 Ankyrin_rpt-contain_dom 637 710
No external refs found!