1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G55490

AT3G55490


Description : GINS complex protein


Gene families : OG0004275 (Archaeplastida) Phylogenetic Tree(s): OG0004275_tree ,
OG_05_0004435 (LandPlants) Phylogenetic Tree(s): OG_05_0004435_tree ,
OG_06_0004990 (SeedPlants) Phylogenetic Tree(s): OG_06_0004990_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G55490
Cluster HCCA: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
Gb_08816 No alias component PSF3 of GINS DNA replication fork maintenance complex 0.02 Archaeplastida
Mp6g07160.1 No alias component PSF3 of GINS DNA replication fork maintenance complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP Neighborhood
BP GO:0000725 recombinational repair IEP Neighborhood
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Neighborhood
MF GO:0004640 phosphoribosylanthranilate isomerase activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
CC GO:0005834 heterotrimeric G-protein complex IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006346 methylation-dependent chromatin silencing IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006370 7-methylguanosine mRNA capping IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0007059 chromosome segregation IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0007202 activation of phospholipase C activity IEP Neighborhood
CC GO:0008076 voltage-gated potassium channel complex IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009452 7-methylguanosine RNA capping IEP Neighborhood
BP GO:0009645 response to low light intensity stimulus IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009875 pollen-pistil interaction IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0010165 response to X-ray IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010231 maintenance of seed dormancy IEP Neighborhood
BP GO:0010244 response to low fluence blue light stimulus by blue low-fluence system IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010492 maintenance of shoot apical meristem identity IEP Neighborhood
BP GO:0010517 regulation of phospholipase activity IEP Neighborhood
BP GO:0010518 positive regulation of phospholipase activity IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0010863 positive regulation of phospholipase C activity IEP Neighborhood
BP GO:0010919 regulation of inositol phosphate biosynthetic process IEP Neighborhood
BP GO:0015939 pantothenate metabolic process IEP Neighborhood
BP GO:0015940 pantothenate biosynthetic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
CC GO:0016514 SWI/SNF complex IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
MF GO:0016881 acid-amino acid ligase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019478 D-amino acid catabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031048 chromatin silencing by small RNA IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0032877 positive regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032960 regulation of inositol trisphosphate biosynthetic process IEP Neighborhood
CC GO:0034702 ion channel complex IEP Neighborhood
CC GO:0034703 cation channel complex IEP Neighborhood
CC GO:0034705 potassium channel complex IEP Neighborhood
MF GO:0035197 siRNA binding IEP Neighborhood
BP GO:0036260 RNA capping IEP Neighborhood
BP GO:0040029 regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043687 post-translational protein modification IEP Neighborhood
CC GO:0044214 spanning component of plasma membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0045132 meiotic chromosome segregation IEP Neighborhood
BP GO:0045740 positive regulation of DNA replication IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0046416 D-amino acid metabolic process IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051052 regulation of DNA metabolic process IEP Neighborhood
BP GO:0051054 positive regulation of DNA metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051253 negative regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051345 positive regulation of hydrolase activity IEP Neighborhood
BP GO:0060191 regulation of lipase activity IEP Neighborhood
BP GO:0060193 positive regulation of lipase activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0061980 regulatory RNA binding IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
CC GO:0089717 spanning component of membrane IEP Neighborhood
BP GO:0090068 positive regulation of cell cycle process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:0097437 maintenance of dormancy IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
BP GO:0098813 nuclear chromosome segregation IEP Neighborhood
BP GO:1900274 regulation of phospholipase C activity IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
CC GO:1902495 transmembrane transporter complex IEP Neighborhood
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1902930 regulation of alcohol biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1905360 GTPase complex IEP Neighborhood
CC GO:1990351 transporter complex IEP Neighborhood
BP GO:2000105 positive regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR021151 GINS_A 45 147
No external refs found!