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  5. Zm00001e041204_P001

Zm00001e041204_P001


Description : Protein trichome birefringence-like 2 OS=Arabidopsis thaliana (sp|q8vyr3|tbl2_arath : 519.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000507 (LandPlants) Phylogenetic Tree(s): OG_05_0000507_tree ,
OG_06_0000491 (SeedPlants) Phylogenetic Tree(s): OG_06_0000491_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041204_P001
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00137180 evm_27.TU.AmTr_v1... Protein PMR5 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00021p00122990 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00114p00046060 evm_27.TU.AmTr_v1... Protein trichome birefringence-like 36 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G30900 TBL43 TRICHOME BIREFRINGENCE-LIKE 43 0.03 Archaeplastida
AT3G11030 TBL32 TRICHOME BIREFRINGENCE-LIKE 32 0.02 Archaeplastida
AT5G49340 TBL4 TRICHOME BIREFRINGENCE-LIKE 4 0.01 Archaeplastida
GSVIVT01000843001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020723001 No alias Protein trichome birefringence-like 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_19986 No alias Protein trichome berefringence-like 7 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g30970.1 No alias Protein trichome birefringence-like 8 OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g61460.1 No alias xylan O-acetyltransferase (XOAT) 0.05 Archaeplastida
LOC_Os03g18110.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g18120.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os06g10560.1 No alias Protein trichome birefringence-like 1 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g34060.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g49280.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
MA_20334g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_366027g0010 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_467548g0010 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_5701g0010 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc01g079400.3.1 No alias Protein trichome birefringence-like 6 OS=Arabidopsis... 0.01 Archaeplastida
Solyc02g082940.3.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc03g095810.3.1 No alias xylan O-acetyltransferase (XOAT) 0.04 Archaeplastida
Solyc05g052440.2.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
Solyc05g052540.2.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc06g051350.4.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Solyc10g007450.2.1 No alias Protein trichome birefringence-like 42 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g008030.4.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.02 Archaeplastida
Solyc12g044450.2.1 No alias Protein trichome birefringence-like 42 OS=Arabidopsis... 0.01 Archaeplastida
Zm00001e019393_P001 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
Zm00001e020302_P001 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.04 Archaeplastida
Zm00001e031480_P001 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR025846 PMR5_N_dom 365 417
IPR026057 PC-Esterase 418 703
No external refs found!