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Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 186.0)
Gene families : OG0000379 (Archaeplastida) Phylogenetic Tree(s): OG0000379_tree ,
OG_05_0000514 (LandPlants) Phylogenetic Tree(s): OG_05_0000514_tree ,
OG_06_0001859 (SeedPlants) Phylogenetic Tree(s): OG_06_0001859_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e041206_P001 | |
| Cluster | HCCA: Cluster_177 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00148p00068590 | evm_27.TU.AmTr_v1... | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| AT1G08050 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.04 | Archaeplastida | |
| AT5G49665 | No alias | Zinc finger (C3HC4-type RING finger) family protein | 0.04 | Archaeplastida | |
| Cpa|evm.model.tig00000605.6 | No alias | RNA biosynthesis.RNA polymerase II-dependent... | 0.02 | Archaeplastida | |
| Cpa|evm.model.tig00000802.25 | No alias | No description available | 0.02 | Archaeplastida | |
| GSVIVT01016259001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.04 | Archaeplastida | |
| Gb_07921 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os03g04890.1 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os04g42980.1 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os08g03270.1 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| LOC_Os10g32740.1 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_11225g0010 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_218345g0010 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Solyc02g091710.3.1 | No alias | ubiquitin protein ligase (WAV3) | 0.04 | Archaeplastida | |
| Solyc05g056140.4.1 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida | |
| Zm00001e023647_P001 | No alias | E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0008037 | cell recognition | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009581 | detection of external stimulus | IEP | Neighborhood |
| BP | GO:0009582 | detection of abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009583 | detection of light stimulus | IEP | Neighborhood |
| BP | GO:0009584 | detection of visible light | IEP | Neighborhood |
| BP | GO:0009605 | response to external stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0018298 | protein-chromophore linkage | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0031625 | ubiquitin protein ligase binding | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| MF | GO:0044389 | ubiquitin-like protein ligase binding | IEP | Neighborhood |
| BP | GO:0048544 | recognition of pollen | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051606 | detection of stimulus | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |