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  5. Zm00001e041310_P001

Zm00001e041310_P001


Description : transcription factor (LIM)


Gene families : OG0000926 (Archaeplastida) Phylogenetic Tree(s): OG0000926_tree ,
OG_05_0029560 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0028071 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041310_P001
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259550 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LIM... 0.03 Archaeplastida
AT1G01780 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT1G10200 WLIM1 GATA type zinc finger transcription factor family protein 0.04 Archaeplastida
AT2G45800 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT3G61230 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
GSVIVT01007812001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.03 Archaeplastida
GSVIVT01019807001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.04 Archaeplastida
GSVIVT01026849001 No alias RNA biosynthesis.transcriptional activation.LIM... 0.02 Archaeplastida
Gb_09450 No alias transcription factor (LIM) 0.06 Archaeplastida
LOC_Os02g42820.1 No alias transcription factor (LIM) 0.08 Archaeplastida
LOC_Os04g45010.1 No alias transcription factor (LIM) 0.08 Archaeplastida
LOC_Os10g35930.1 No alias transcription factor (LIM) 0.12 Archaeplastida
LOC_Os12g32620.1 No alias transcription factor (LIM) 0.03 Archaeplastida
Smo229974 No alias RNA biosynthesis.transcriptional activation.LIM... 0.04 Archaeplastida
Solyc01g094320.3.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Solyc05g049870.3.1 No alias transcription factor (LIM) 0.09 Archaeplastida
Solyc08g007940.4.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Solyc10g017520.3.1 No alias transcription factor (LIM) 0.04 Archaeplastida
Zm00001e029431_P002 No alias transcription factor (LIM) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001781 Znf_LIM 107 162
IPR001781 Znf_LIM 11 66
No external refs found!