Zm00001e041322_P001


Description : transcription factor (YABBY)


Gene families : OG0000890 (Archaeplastida) Phylogenetic Tree(s): OG0000890_tree ,
OG_05_0006725 (LandPlants) Phylogenetic Tree(s): OG_05_0006725_tree ,
OG_06_0004255 (SeedPlants) Phylogenetic Tree(s): OG_06_0004255_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041322_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00165390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00085p00032940 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.05 Archaeplastida
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.07 Archaeplastida
Gb_22423 No alias transcription factor (YABBY) 0.08 Archaeplastida
LOC_Os02g42950.1 No alias transcription factor (YABBY) 0.09 Archaeplastida
LOC_Os04g45330.1 No alias transcription factor (YABBY) 0.1 Archaeplastida
LOC_Os10g36420.1 No alias transcription factor (YABBY) 0.03 Archaeplastida
Solyc01g010240.3.1 No alias transcription factor (YABBY) 0.04 Archaeplastida
Solyc01g091010.3.1 No alias transcription factor (YABBY) 0.08 Archaeplastida
Solyc08g079100.3.1 No alias transcription factor (YABBY) 0.06 Archaeplastida
Solyc11g071810.2.1 No alias transcription factor (YABBY) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006780 YABBY 23 224
No external refs found!