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  5. Zm00001e041370_P001

Zm00001e041370_P001


Description : no hits & (original description: none)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000175 (LandPlants) Phylogenetic Tree(s): OG_05_0000175_tree ,
OG_06_0000116 (SeedPlants) Phylogenetic Tree(s): OG_06_0000116_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041370_P001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00051710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00040p00197990 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.04 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.04 Archaeplastida
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_00010 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_04647 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_33184 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41385 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46100.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g38110.1 No alias RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
MA_122471g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_15246g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_9521306g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c20_12240V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g006360.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004560 alpha-L-fucosidase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015928 fucosidase activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!