Zm00001e041372_P001


Description : transcription factor (RAV/NGATHA)


Gene families : OG0000363 (Archaeplastida) Phylogenetic Tree(s): OG0000363_tree ,
OG_05_0000191 (LandPlants) Phylogenetic Tree(s): OG_05_0000191_tree ,
OG_06_0013135 (SeedPlants) Phylogenetic Tree(s): OG_06_0013135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041372_P001
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00108490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.B3... 0.04 Archaeplastida
AMTR_s00047p00199500 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT2G46870 NGA1 AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
AT3G61970 NGA2 AP2/B3-like transcriptional factor family protein 0.03 Archaeplastida
GSVIVT01036447001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
LOC_Os01g04800.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.04 Archaeplastida
LOC_Os06g01860.1 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida
LOC_Os08g06120.1 No alias transcription factor (RAV/NGATHA) 0.02 Archaeplastida
LOC_Os11g05740.1 No alias transcription factor (RAV/NGATHA) 0.05 Archaeplastida
MA_10436315g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
MA_246350g0010 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
MA_3834g0010 No alias transcription factor (RAV/NGATHA) 0.11 Archaeplastida
MA_865117g0010 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.03 Archaeplastida
MA_953813g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp2g22250.1 No alias transcription factor (RAV/NGATHA). transcription factor (AP2-RAV) 0.02 Archaeplastida
Pp3c1_16700V3.1 No alias related to ABI3/VP1 1 0.02 Archaeplastida
Pp3c2_23660V3.1 No alias AP2/B3 transcription factor family protein 0.02 Archaeplastida
Solyc05g004000.1.1 No alias transcription factor (RAV/NGATHA) 0.04 Archaeplastida
Solyc08g013690.1.1 No alias transcription factor (RAV/NGATHA) 0.04 Archaeplastida
Solyc10g083210.2.1 No alias transcription factor (RAV/NGATHA) 0.03 Archaeplastida
Zm00001e002215_P001 No alias transcription factor (RAV/NGATHA) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 87 191
No external refs found!