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  5. Zm00001e041374_P001

Zm00001e041374_P001


Description : Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana (sp|b6sfa4|maa3_arath : 193.0)


Gene families : OG0001714 (Archaeplastida) Phylogenetic Tree(s): OG0001714_tree ,
OG_05_0001029 (LandPlants) Phylogenetic Tree(s): OG_05_0001029_tree ,
OG_06_0001106 (SeedPlants) Phylogenetic Tree(s): OG_06_0001106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041374_P001
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AT5G37030 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
AT5G37140 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Archaeplastida
AT5G37165 No alias No description available 0.04 Archaeplastida
GSVIVT01028739001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01028740001 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_27268 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g45910.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49270.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os04g49310.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc12g013590.2.1 No alias Probable helicase MAGATAMA 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!