Zm00001e041436_P002

Description : component RFC2 of PCNA sliding clamp loader complex

Gene families : OG0005217 (Archaeplastida) Phylogenetic Tree(s): OG0005217_tree ,
OG_05_0005817 (LandPlants) Phylogenetic Tree(s): OG_05_0005817_tree ,
OG_06_0006740 (SeedPlants) Phylogenetic Tree(s): OG_06_0006740_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e041436_P002
Cluster	HCCA: Cluster_346

Target	Alias	Description	ECC score	Gene Family Method
AT1G63160	RFC2	replication factor C 2	0.03	Archaeplastida
Cpa\|evm.model.tig00000042.30	No alias	Cell cycle.interphase.DNA...	0.02	Archaeplastida
Cre07.g337150	No alias	Cell cycle.interphase.DNA...	0.03	Archaeplastida
LOC_Os04g48060.1	No alias	component RFC2 of PCNA sliding clamp loader complex	0.03	Archaeplastida
Pp3c16_21800V3.1	No alias	replication factor C 2	0.05	Archaeplastida
Solyc08g080510.4.1	No alias	component RFC2 of PCNA sliding clamp loader complex	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006275	regulation of DNA replication	IEP	Neighborhood
BP	GO:0006396	RNA processing	IEP	Neighborhood
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0006413	translational initiation	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0009059	macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
MF	GO:0034061	DNA polymerase activity	IEP	Neighborhood
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0051052	regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0090304	nucleic acid metabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	49	167
IPR013748	Rep_factorC_C	235	320

External Links

No external refs found!