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  5. Zm00001e041559_P002

Zm00001e041559_P002


Description : EXO9-SUPERKILLER interaction factor (SKI7). GTPase component HBS1/SPL33 of DOM34-HBS1 aberrant mRNA detection complex


Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0003968 (LandPlants) Phylogenetic Tree(s): OG_05_0003968_tree ,
OG_06_0003764 (SeedPlants) Phylogenetic Tree(s): OG_06_0003764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041559_P002
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT5G10630 No alias Translation elongation factor EF1A/initiation factor... 0.05 Archaeplastida
Cre06.g284750 No alias Protein biosynthesis.translation termination.eRF3... 0.02 Archaeplastida
MA_10313749g0010 No alias Elongation factor 1-alpha OS=Hordeum vulgare... 0.03 Archaeplastida
MA_10430514g0010 No alias No annotation 0.03 Archaeplastida
Mp1g00820.1 No alias eRF3 peptide release factor 0.05 Archaeplastida
Mp4g00870.1 No alias EXO9-SUPERKILLER interaction factor (SKI7). GTPase... 0.04 Archaeplastida
Pp3c27_2160V3.1 No alias Translation elongation factor EF1A/initiation factor... 0.02 Archaeplastida
Pp3c5_28870V3.1 No alias Translation elongation factor EF1A/initiation factor... 0.03 Archaeplastida
Smo115313 No alias Protein biosynthesis.translation termination.eRF3... 0.05 Archaeplastida
Smo171512 No alias Protein biosynthesis.translation elongation.eEF1A... 0.02 Archaeplastida
Smo230720 No alias Elongation factor 1-alpha OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Solyc06g069020.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 573 676
IPR000795 TF_GTP-bd_dom 250 467
No external refs found!