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  5. Zm00001e041723_P001

Zm00001e041723_P001


Description : organic cation transporter (OCT)


Gene families : OG0001017 (Archaeplastida) Phylogenetic Tree(s): OG0001017_tree ,
OG_05_0000761 (LandPlants) Phylogenetic Tree(s): OG_05_0000761_tree ,
OG_06_0005598 (SeedPlants) Phylogenetic Tree(s): OG_06_0005598_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e041723_P001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G73220 AtOCT1, 1-Oct organic cation/carnitine transporter1 0.09 Archaeplastida
MA_10436973g0010 No alias organic cation transporter (OCT) 0.04 Archaeplastida
Solyc05g053860.4.1 No alias organic cation transporter (OCT) 0.04 Archaeplastida
Zm00001e035248_P001 No alias organic cation transporter (OCT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006664 glycolipid metabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0046467 membrane lipid biosynthetic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1903509 liposaccharide metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 1 276
No external refs found!