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  5. Zm00001e042026_P001

Zm00001e042026_P001


Description : ATP-dependent Clp protease proteolytic subunit OS=Zea mays (sp|p26567|clpp_maize : 194.0)


Gene families : OG0005411 (Archaeplastida) Phylogenetic Tree(s): OG0005411_tree ,
OG_05_0003897 (LandPlants) Phylogenetic Tree(s): OG_05_0003897_tree ,
OG_06_0002670 (SeedPlants) Phylogenetic Tree(s): OG_06_0002670_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042026_P001
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00125230 evm_27.TU.AmTr_v1... ATP-dependent Clp protease proteolytic subunit... 0.04 Archaeplastida
ATCG00670 CLPP1, PCLPP plastid-encoded CLP P 0.05 Archaeplastida
Gb_41557 No alias ATP-dependent Clp protease proteolytic subunit OS=Cycas... 0.06 Archaeplastida
LOC_Os08g15270.1 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.08 Archaeplastida
LOC_Os10g21300.1 No alias ATP-dependent Clp protease proteolytic subunit OS=Oryza... 0.08 Archaeplastida
Mpzg01030.3 No alias proteolytic core component ClpP1/3-6 of chloroplast... 0.01 Archaeplastida
Smo137715 No alias Protein degradation.peptidase families.serine-type... 0.06 Archaeplastida
Solyc00g500023.1.1 No alias ATP-dependent Clp protease proteolytic subunit... 0.05 Archaeplastida
Zm00001e042048_P001 No alias ATP-dependent Clp protease proteolytic subunit OS=Zea... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023562 ClpP/TepA 1 72
No external refs found!