- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no hits & (original description: none)
Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e042046_P001 | |
| Cluster | HCCA: Cluster_255 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG00830 | RPL2.1 | ribosomal protein L2 | 0.11 | Archaeplastida | |
| ATCG01310 | RPL2.2 | ribosomal protein L2 | 0.11 | Archaeplastida | |
| Gb_17475 | No alias | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.06 | Archaeplastida | |
| Gb_24024 | No alias | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.06 | Archaeplastida | |
| Gb_25047 | No alias | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.06 | Archaeplastida | |
| Gb_37512 | No alias | 50S ribosomal protein L2, chloroplastic OS=Cycas... | 0.04 | Archaeplastida | |
| Mp1g19370.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Smo137825 | No alias | Protein biosynthesis.organelle translation... | 0.07 | Archaeplastida | |
| Solyc00g500035.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.04 | Archaeplastida | |
| Solyc00g500036.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | Archaeplastida | |
| Solyc00g500047.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Solanum... | 0.05 | Archaeplastida | |
| Solyc00g500079.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.04 | Archaeplastida | |
| Solyc00g500080.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | Archaeplastida | |
| Solyc00g500150.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.04 | Archaeplastida | |
| Solyc00g500297.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.04 | Archaeplastida | |
| Solyc00g500298.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.07 | Archaeplastida | |
| Solyc09g050067.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.12 | Archaeplastida | |
| Solyc09g050068.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Solanum... | 0.09 | Archaeplastida | |
| Solyc10g012217.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.05 | Archaeplastida | |
| Solyc10g018610.2.1 | No alias | No annotation | 0.06 | Archaeplastida | |
| Solyc10g047090.2.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
| Zm00001e036845_P001 | No alias | 50S ribosomal protein L2, chloroplastic OS=Sorghum... | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| BP | GO:0015985 | energy coupled proton transport, down electrochemical gradient | IEP | Neighborhood |
| BP | GO:0015986 | ATP synthesis coupled proton transport | IEP | Neighborhood |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Neighborhood |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |