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  5. AT3G56800

AT3G56800 (CAM3, acam-3)


Aliases : CAM3, acam-3

Description : calmodulin 3


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000412 (LandPlants) Phylogenetic Tree(s): OG_05_0000412_tree ,
OG_06_0000454 (SeedPlants) Phylogenetic Tree(s): OG_06_0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G56800
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00091p00120960 evm_27.TU.AmTr_v1... RNA processing.messenger ribonucleoprotein particle... 0.02 Archaeplastida
AT1G12310 No alias Calcium-binding EF-hand family protein 0.03 Archaeplastida
AT1G18210 No alias Calcium-binding EF-hand family protein 0.06 Archaeplastida
AT1G62820 No alias Calcium-binding EF-hand family protein 0.04 Archaeplastida
AT3G43810 CAM7 calmodulin 7 0.02 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.01 Archaeplastida
Cre03.g150300 No alias Calmodulin-3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01000380001 No alias Calmodulin OS=Solanum lycopersicum 0.03 Archaeplastida
GSVIVT01003796001 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01037418001 No alias Calmodulin-related protein OS=Petunia hybrida 0.04 Archaeplastida
Gb_20553 No alias Calmodulin OS=Hordeum vulgare (sp|p62162|calm_horvu : 248.0) 0.02 Archaeplastida
LOC_Os01g16240.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.06 Archaeplastida
LOC_Os01g17190.1 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
LOC_Os02g39380.1 No alias Probable calcium-binding protein CML17 OS=Oryza sativa... 0.01 Archaeplastida
LOC_Os03g21380.2 No alias Probable calcium-binding protein CML27 OS=Oryza sativa... 0.01 Archaeplastida
MA_10429336g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.01 Archaeplastida
MA_15211g0010 No alias Calmodulin-related protein OS=Petunia hybrida... 0.02 Archaeplastida
MA_254754g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_269415g0010 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9257733g0010 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.01 Archaeplastida
Mp1g00710.1 No alias DNA repair protein (CEN2). centrin component CEN of... 0.01 Archaeplastida
Pp3c17_17270V3.1 No alias centrin2 0.02 Archaeplastida
Pp3c25_10220V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Pp3c4_1800V3.1 No alias centrin2 0.03 Archaeplastida
Pp3c9_25180V3.1 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
Solyc02g067220.4.1 No alias no description available(sp|q93z27|cml46_arath : 83.2) 0.02 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e027331_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0019722 calcium-mediated signaling TAS Interproscan
BP GO:0048193 Golgi vesicle transport RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006497 protein lipidation IEP Neighborhood
BP GO:0006498 N-terminal protein lipidation IEP Neighborhood
BP GO:0006499 N-terminal protein myristoylation IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009642 response to light intensity IEP Neighborhood
BP GO:0009646 response to absence of light IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009846 pollen germination IEP Neighborhood
BP GO:0015690 aluminum cation transport IEP Neighborhood
BP GO:0018377 protein myristoylation IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031226 intrinsic component of plasma membrane IEP Neighborhood
BP GO:0031365 N-terminal protein amino acid modification IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0050832 defense response to fungus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072512 trivalent inorganic cation transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 83 146
IPR002048 EF_hand_dom 12 73
No external refs found!