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  5. Zm00001e042235_P001

Zm00001e042235_P001


Description : apoprotein PsaB of PS-I complex


Gene families : OG0000489 (Archaeplastida) Phylogenetic Tree(s): OG0000489_tree ,
OG_05_0000306 (LandPlants) Phylogenetic Tree(s): OG_05_0000306_tree ,
OG_06_0001235 (SeedPlants) Phylogenetic Tree(s): OG_06_0001235_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042235_P001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00250910 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.09 Archaeplastida
AMTR_s00063p00185460 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.09 Archaeplastida
AMTR_s00076p00111250 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.09 Archaeplastida
AMTR_s00334p00015340 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.09 Archaeplastida
AMTR_s01196p00002960 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Morus indica 0.09 Archaeplastida
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.19 Archaeplastida
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.2 Archaeplastida
GSVIVT01009295001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01017483001 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Vitis vinifera 0.06 Archaeplastida
GSVIVT01017484001 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Populus alba 0.06 Archaeplastida
GSVIVT01023733001 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
Gb_09026 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.15 Archaeplastida
Gb_09027 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.11 Archaeplastida
Gb_11361 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.13 Archaeplastida
Gb_11944 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.12 Archaeplastida
Gb_19163 No alias Photosystem I P700 chlorophyll a apoprotein A2 OS=Cycas... 0.12 Archaeplastida
Gb_20142 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 Archaeplastida
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.07 Archaeplastida
LOC_Os01g57962.1 No alias apoprotein PsaB of PS-I complex 0.23 Archaeplastida
LOC_Os01g57964.1 No alias apoprotein PsaA of PS-I complex 0.17 Archaeplastida
LOC_Os04g16760.1 No alias apoprotein PsaA of PS-I complex 0.25 Archaeplastida
LOC_Os05g01675.1 No alias apoprotein PsaA of PS-I complex 0.25 Archaeplastida
LOC_Os10g21248.1 No alias apoprotein PsaB of PS-I complex 0.03 Archaeplastida
LOC_Os10g21250.1 No alias apoprotein PsaA of PS-I complex 0.27 Archaeplastida
LOC_Os10g38229.1 No alias apoprotein PsaA of PS-I complex 0.31 Archaeplastida
LOC_Os10g38234.1 No alias apoprotein PsaB of PS-I complex 0.27 Archaeplastida
Mp1g07160.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.06 Archaeplastida
Mp1g16220.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.06 Archaeplastida
Mp3g20630.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.06 Archaeplastida
Smo236842 No alias Photosynthesis.photophosphorylation.photosystem I.PS-I... 0.19 Archaeplastida
Solyc00g500056.1.1 No alias apoprotein PsaB of PS-I complex 0.18 Archaeplastida
Solyc00g500057.1.1 No alias apoprotein PsaA of PS-I complex 0.18 Archaeplastida
Solyc00g500138.1.1 No alias apoprotein PsaB of PS-I complex 0.18 Archaeplastida
Solyc00g500208.1.1 No alias apoprotein PsaB of PS-I complex 0.18 Archaeplastida
Solyc00g500209.1.1 No alias apoprotein PsaA of PS-I complex 0.18 Archaeplastida
Solyc01g017230.2.1 No alias NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.04 Archaeplastida
Solyc01g017300.2.1 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.05 Archaeplastida
Solyc02g020960.2.1 No alias no hits & (original description: none) 0.18 Archaeplastida
Solyc05g020010.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.04 Archaeplastida
Solyc06g009940.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.15 Archaeplastida
Solyc07g021250.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.03 Archaeplastida
Solyc12g035580.1.1 No alias Photosystem I P700 chlorophyll a apoprotein A2... 0.09 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 8 727
No external refs found!