1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e042272_P001

Zm00001e042272_P001


Description : component psRPS2 of small ribosomal subunit proteome


Gene families : OG0002098 (Archaeplastida) Phylogenetic Tree(s): OG0002098_tree ,
OG_05_0001646 (LandPlants) Phylogenetic Tree(s): OG_05_0001646_tree ,
OG_06_0001309 (SeedPlants) Phylogenetic Tree(s): OG_06_0001309_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042272_P001
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00108730 evm_27.TU.AmTr_v1... 30S ribosomal protein S2, chloroplastic OS=Amborella trichopoda 0.02 Archaeplastida
ATCG00160 RPS2 ribosomal protein S2 0.09 Archaeplastida
Gb_26286 No alias ATP synthase subunit alpha, chloroplastic OS=Cycas... 0.04 Archaeplastida
LOC_Os02g24612.1 No alias component psRPS2 of small ribosomal subunit proteome 0.13 Archaeplastida
LOC_Os10g38278.1 No alias component psRPS2 of small ribosomal subunit proteome 0.13 Archaeplastida
Mp3g24030.1 No alias 30S ribosomal protein S2, chloroplastic OS=Marchantia... 0.03 Archaeplastida
Smo137779 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Solyc00g500051.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.05 Archaeplastida
Solyc00g500134.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.06 Archaeplastida
Solyc00g500204.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.06 Archaeplastida
Solyc00g500291.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.06 Archaeplastida
Solyc00g500320.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.06 Archaeplastida
Solyc09g018555.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
Solyc12g062630.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Solanum... 0.09 Archaeplastida
Zm00001e042037_P001 No alias 30S ribosomal protein S2, chloroplastic OS=Zea mays... 0.14 Archaeplastida
Zm00001e042059_P001 No alias 30S ribosomal protein S2, chloroplastic OS=Zea mays... 0.14 Archaeplastida
Zm00001e042104_P001 No alias 30S ribosomal protein S2, chloroplastic OS=Zea mays... 0.11 Archaeplastida
Zm00001e042168_P001 No alias 30S ribosomal protein S2, chloroplastic OS=Zea mays... 0.14 Archaeplastida
Zm00001e042442_P001 No alias no hits & (original description: none) 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001865 Ribosomal_S2 31 187
No external refs found!