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  5. Zm00001e042372_P001

Zm00001e042372_P001


Description : Ribulose bisphosphate carboxylase large chain OS=Sorghum bicolor (sp|a1e9t2|rbl_sorbi : 251.0)


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042372_P001
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
MA_103636g0010 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Smo137874 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Zm00001e010393_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000685 RuBisCO_lsu_C 1 115
No external refs found!