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  5. Zm00001e042442_P001

Zm00001e042442_P001


Description : no hits & (original description: none)


Gene families : OG0002098 (Archaeplastida) Phylogenetic Tree(s): OG0002098_tree ,
OG_05_0001646 (LandPlants) Phylogenetic Tree(s): OG_05_0001646_tree ,
OG_06_0001309 (SeedPlants) Phylogenetic Tree(s): OG_06_0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042442_P001
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00108730 evm_27.TU.AmTr_v1... 30S ribosomal protein S2, chloroplastic OS=Amborella trichopoda 0.05 Archaeplastida
ATCG00160 RPS2 ribosomal protein S2 0.16 Archaeplastida
Gb_26286 No alias ATP synthase subunit alpha, chloroplastic OS=Cycas... 0.04 Archaeplastida
LOC_Os02g24612.1 No alias component psRPS2 of small ribosomal subunit proteome 0.15 Archaeplastida
LOC_Os10g21234.1 No alias component psRPS2 of small ribosomal subunit proteome 0.12 Archaeplastida
LOC_Os10g38278.1 No alias component psRPS2 of small ribosomal subunit proteome 0.15 Archaeplastida
Smo137779 No alias Protein biosynthesis.organelle translation... 0.14 Archaeplastida
Solyc00g500051.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.05 Archaeplastida
Solyc00g500134.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500204.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500291.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc00g500320.1.1 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida
Solyc12g062630.1.1 No alias 30S ribosomal protein S2, chloroplastic OS=Solanum... 0.11 Archaeplastida
Zm00001e042073_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042272_P001 No alias component psRPS2 of small ribosomal subunit proteome 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
CC GO:0009579 thylakoid IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!