Zm00001e042446_P001


Description : 50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor (sp|a1e9w6|rk2_sorbi : 208.0)


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042446_P001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Gb_17475 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Gb_24024 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Gb_25047 No alias 50S ribosomal protein L2, chloroplastic OS=Cycas... 0.02 Archaeplastida
Smo137825 No alias Protein biosynthesis.organelle translation... 0.02 Archaeplastida
Zm00001e034694_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e042122_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida
Zm00001e042133_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004107 chorismate synthase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006835 dicarboxylic acid transport IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015740 C4-dicarboxylate transport IEP Neighborhood
BP GO:0015743 malate transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
CC GO:0030880 RNA polymerase complex IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 1 117
No external refs found!