Zm00001e042446_P001

Description : 50S ribosomal protein L2, chloroplastic OS=Sorghum bicolor (sp|a1e9w6|rk2_sorbi : 208.0)

Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e042446_P001
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
Gb_17475	No alias	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.02	Archaeplastida
Gb_24024	No alias	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.02	Archaeplastida
Gb_25047	No alias	50S ribosomal protein L2, chloroplastic OS=Cycas...	0.02	Archaeplastida
Smo137825	No alias	Protein biosynthesis.organelle translation...	0.02	Archaeplastida
Zm00001e034694_P001	No alias	no hits & (original description: none)	0.02	Archaeplastida
Zm00001e042122_P001	No alias	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	Archaeplastida
Zm00001e042133_P001	No alias	50S ribosomal protein L2, chloroplastic OS=Sorghum...	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003746	translation elongation factor activity	IEP	Neighborhood
MF	GO:0004107	chorismate synthase activity	IEP	Neighborhood
MF	GO:0004177	aminopeptidase activity	IEP	Neighborhood
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Neighborhood
BP	GO:0006414	translational elongation	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016211	ammonia ligase activity	IEP	Neighborhood
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Neighborhood
CC	GO:0030880	RNA polymerase complex	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR022669	Ribosomal_L2_C	1	117

External Links

No external refs found!

Zm00001e042446_P001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation