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Description : Ribulose bisphosphate carboxylase large chain OS=Zea mays (sp|p00874|rbl_maize : 568.0)
Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e042465_P001 | |
| Cluster | HCCA: Cluster_83 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272640 | evm_27.TU.AmTr_v1... | Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba | 0.02 | Archaeplastida | |
| AMTR_s00012p00184400 | evm_27.TU.AmTr_v1... | Ribulose bisphosphate carboxylase large chain... | 0.02 | Archaeplastida | |
| AMTR_s00606p00006850 | evm_27.TU.AmTr_v1... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | Archaeplastida | |
| ATCG00490 | RBCL | ribulose-bisphosphate carboxylases | 0.07 | Archaeplastida | |
| ATMG00280 | ORF110A | Ribulose bisphosphate carboxylase large chain, catalytic domain | 0.02 | Archaeplastida | |
| Gb_07644 | No alias | Ribulose bisphosphate carboxylase large chain... | 0.03 | Archaeplastida | |
| Gb_15502 | No alias | Ribulose bisphosphate carboxylase large chain... | 0.03 | Archaeplastida | |
| Gb_37464 | No alias | Ribulose bisphosphate carboxylase large chain... | 0.03 | Archaeplastida | |
| LOC_Os01g58020.1 | No alias | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.03 | Archaeplastida | |
| LOC_Os10g21268.1 | No alias | large subunit of ribulose-1,5-bisphosphat... | 0.05 | Archaeplastida | |
| LOC_Os11g32770.1 | No alias | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.03 | Archaeplastida | |
| LOC_Os12g10580.1 | No alias | component psRPS15 of small ribosomal subunit proteome | 0.05 | Archaeplastida | |
| Mp3g01300.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Smo137874 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.06 | Archaeplastida | |
| Solyc00g500063.1.1 | No alias | large subunit of ribulose-1,5-bisphosphat... | 0.07 | Archaeplastida | |
| Solyc07g021200.1.1 | No alias | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.02 | Archaeplastida | |
| Solyc12g062550.1.1 | No alias | Ribulose bisphosphate carboxylase large chain OS=Solanum... | 0.02 | Archaeplastida | |
| Solyc12g062560.1.1 | No alias | DNA-directed RNA polymerase subunit beta OS=Nicotiana... | 0.03 | Archaeplastida | |
| Zm00001e031080_P001 | No alias | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.06 | Archaeplastida | |
| Zm00001e036792_P001 | No alias | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.05 | Archaeplastida | |
| Zm00001e042148_P001 | No alias | no hits & (original description: none) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016160 | amylase activity | IEP | Neighborhood |
| MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
| CC | GO:0031360 | intrinsic component of thylakoid membrane | IEP | Neighborhood |
| CC | GO:0031361 | integral component of thylakoid membrane | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| MF | GO:0048037 | cofactor binding | IEP | Neighborhood |
| MF | GO:0051536 | iron-sulfur cluster binding | IEP | Neighborhood |
| MF | GO:0051540 | metal cluster binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000685 | RuBisCO_lsu_C | 1 | 251 |
| No external refs found! |