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  5. Zm00001e042494_P001

Zm00001e042494_P001


Description : Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize : 778.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 319.5)


Gene families : OG0000535 (Archaeplastida) Phylogenetic Tree(s): OG0000535_tree ,
OG_05_0000281 (LandPlants) Phylogenetic Tree(s): OG_05_0000281_tree ,
OG_06_0000124 (SeedPlants) Phylogenetic Tree(s): OG_06_0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e042494_P001
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00270640 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 Archaeplastida
AT3G07820 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G07830 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G07840 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT3G07850 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
AT3G14040 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
AT5G48140 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
GSVIVT01028044001 No alias Exopolygalacturonase clone GBGE184 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01030017001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 Archaeplastida
GSVIVT01030023001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 Archaeplastida
GSVIVT01030030001 No alias Polygalacturonase OS=Gossypium hirsutum 0.03 Archaeplastida
GSVIVT01035103001 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia 0.04 Archaeplastida
LOC_Os01g33300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.09 Archaeplastida
LOC_Os02g10300.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.07 Archaeplastida
LOC_Os06g35320.1 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.06 Archaeplastida
LOC_Os06g40890.1 No alias Exopolygalacturonase OS=Zea mays (sp|p26216|pglr1_maize... 0.03 Archaeplastida
LOC_Os08g23790.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Solyc01g066070.3.1 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.05 Archaeplastida
Solyc06g009200.3.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.05 Archaeplastida
Solyc07g044870.4.1 No alias Polygalacturonase OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e022246_P002 No alias Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.04 Archaeplastida
Zm00001e025021_P003 No alias Exopolygalacturonase OS=Zea mays (sp|p35339|pglr3_maize... 0.03 Archaeplastida
Zm00001e030532_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize : 345.0) 0.06 Archaeplastida
Zm00001e030542_P001 No alias Exopolygalacturonase OS=Zea mays (sp|p35338|pglr2_maize... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 68 399
No external refs found!