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  5. Mp1g00190.1

Mp1g00190.1


Description : pectin methylesterase


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0005471 (LandPlants) Phylogenetic Tree(s): OG_05_0005471_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g00190.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT5G55590 QRT1 Pectin lyase-like superfamily protein 0.02 Archaeplastida
GSVIVT01009729001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.01 Archaeplastida
GSVIVT01014641001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Gb_08496 No alias pectin methylesterase 0.01 Archaeplastida
Gb_17798 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c10_19460V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c16_6660V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_24830V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c5_23400V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_1440V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e029074_P001 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e032213_P001 No alias pectin methylesterase 0.01 Archaeplastida
Zm00001e040018_P001 No alias pectin methylesterase 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000098 sulfur amino acid catabolic process IEP Neighborhood
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004143 diacylglycerol kinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
BP GO:0007205 protein kinase C-activating G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0030328 prenylcysteine catabolic process IEP Neighborhood
BP GO:0030329 prenylcysteine metabolic process IEP Neighborhood
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0097525 spliceosomal snRNP complex IEP Neighborhood
CC GO:0097526 spliceosomal tri-snRNP complex IEP Neighborhood
CC GO:0120114 Sm-like protein family complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 10 301
No external refs found!