1. Home
  2. Species
  3. Marchantia polymorpha
  4. Sequence
  5. Mp1g04290.1

Mp1g04290.1


Description : regulatory component RPT6 of 26S proteasome


Gene families : OG0003868 (Archaeplastida) Phylogenetic Tree(s): OG0003868_tree ,
OG_05_0003884 (LandPlants) Phylogenetic Tree(s): OG_05_0003884_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g04290.1
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AT5G19990 ATSUG1, RPT6A regulatory particle triple-A ATPase 6A 0.08 Archaeplastida
AT5G20000 No alias AAA-type ATPase family protein 0.05 Archaeplastida
Cpa|evm.model.tig00000792.28 No alias Protein degradation.26S proteasome.regulatory... 0.12 Archaeplastida
Cre04.g216600 No alias Protein degradation.26S proteasome.regulatory... 0.17 Archaeplastida
GSVIVT01035767001 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida
Gb_08346 No alias regulatory component RPT6 of 26S proteasome 0.08 Archaeplastida
LOC_Os02g11050.1 No alias regulatory component RPT6 of 26S proteasome 0.12 Archaeplastida
LOC_Os06g39870.1 No alias regulatory component RPT6 of 26S proteasome 0.02 Archaeplastida
MA_10427013g0010 No alias regulatory component RPT6 of 26S proteasome 0.03 Archaeplastida
Pp3c10_2600V3.1 No alias regulatory particle triple-A ATPase 6A 0.03 Archaeplastida
Pp3c1_21950V3.1 No alias regulatory particle triple-A ATPase 6A 0.11 Archaeplastida
Solyc05g018570.3.1 No alias regulatory component RPT6 of 26S proteasome 0.09 Archaeplastida
Solyc05g018590.3.1 No alias regulatory component RPT6 of 26S proteasome 0.07 Archaeplastida
Zm00001e014515_P001 No alias regulatory component RPT6 of 26S proteasome 0.13 Archaeplastida
Zm00001e024980_P001 No alias regulatory component RPT6 of 26S proteasome 0.12 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005801 cis-Golgi network IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 76 131
IPR003959 ATPase_AAA_core 189 322
No external refs found!