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  5. Mp1g06750.1

Mp1g06750.1


Description : RNA helicase (Prp5)


Gene families : OG0005527 (Archaeplastida) Phylogenetic Tree(s): OG0005527_tree ,
OG_05_0005768 (LandPlants) Phylogenetic Tree(s): OG_05_0005768_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g06750.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT1G20920 No alias P-loop containing nucleoside triphosphate hydrolases... 0.05 Archaeplastida
Cre16.g676400 No alias RNA processing.RNA splicing.spliceosome... 0.02 Archaeplastida
GSVIVT01023849001 No alias DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_03798 No alias RNA helicase (Prp5) 0.04 Archaeplastida
MA_175476g0010 No alias RNA helicase (Prp5) 0.04 Archaeplastida
Pp3c6_15830V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Archaeplastida
Solyc12g098700.1.1 No alias RNA helicase (Prp5) 0.1 Archaeplastida
Zm00001e040204_P001 No alias RNA helicase (Prp5) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 560 731
IPR001650 Helicase_C 769 877
No external refs found!