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  5. Mp1g07420.1

Mp1g07420.1


Description : component RPS18 of SSU proteome


Gene families : OG0001796 (Archaeplastida) Phylogenetic Tree(s): OG0001796_tree ,
OG_05_0001726 (LandPlants) Phylogenetic Tree(s): OG_05_0001726_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g07420.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00178430 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.27 Archaeplastida
AMTR_s00142p00099380 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AT1G22780 RPS18A, PFL, PFL1 Ribosomal protein S13/S18 family 0.21 Archaeplastida
AT1G34030 No alias Ribosomal protein S13/S18 family 0.19 Archaeplastida
AT4G09800 RPS18C S18 ribosomal protein 0.22 Archaeplastida
Cre06.g272950 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.45 Archaeplastida
GSVIVT01017975001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.24 Archaeplastida
GSVIVT01034582001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.08 Archaeplastida
Gb_21599 No alias component RPS18 of SSU proteome 0.03 Archaeplastida
Gb_28114 No alias component RPS18 of SSU proteome 0.02 Archaeplastida
LOC_Os03g58050.1 No alias component RPS18 of SSU proteome 0.35 Archaeplastida
LOC_Os07g07709.1 No alias component RPS18 of SSU proteome 0.04 Archaeplastida
MA_10429265g0010 No alias component RPS18 of SSU proteome 0.33 Archaeplastida
MA_10431843g0010 No alias component RPS18 of SSU proteome 0.17 Archaeplastida
Pp3c16_2090V3.1 No alias Ribosomal protein S13/S18 family 0.41 Archaeplastida
Pp3c25_1240V3.1 No alias Ribosomal protein S13/S18 family 0.22 Archaeplastida
Pp3c25_1430V3.1 No alias Ribosomal protein S13/S18 family 0.34 Archaeplastida
Pp3c5_2800V3.1 No alias Ribosomal protein S13/S18 family 0.08 Archaeplastida
Pp3c6_21770V3.1 No alias Ribosomal protein S13/S18 family 0.37 Archaeplastida
Pp3c6_21830V3.1 No alias Ribosomal protein S13/S18 family 0.06 Archaeplastida
Smo267619 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.16 Archaeplastida
Solyc03g078290.3.1 No alias component RPS18 of SSU proteome 0.38 Archaeplastida
Solyc06g073370.4.1 No alias component RPS18 of SSU proteome 0.36 Archaeplastida
Solyc11g005680.2.1 No alias component RPS18 of SSU proteome 0.15 Archaeplastida
Zm00001e005967_P001 No alias component RPS18 of SSU proteome 0.42 Archaeplastida
Zm00001e011880_P001 No alias component RPS18 of SSU proteome 0.42 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005740 mitochondrial envelope IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
CC GO:0031967 organelle envelope IEP Neighborhood
CC GO:0031975 envelope IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR001892 Ribosomal_S13 14 142
No external refs found!