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  5. AT3G57790

AT3G57790


Description : Pectin lyase-like superfamily protein


Gene families : OG0007282 (Archaeplastida) Phylogenetic Tree(s): OG0007282_tree ,
OG_05_0006886 (LandPlants) Phylogenetic Tree(s): OG_05_0006886_tree ,
OG_06_0008928 (SeedPlants) Phylogenetic Tree(s): OG_06_0008928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G57790
Cluster HCCA: Cluster_249


Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0005774 vacuolar membrane IDA Interproscan
BP GO:0005975 carbohydrate metabolic process ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000719 photoreactive repair IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003827 alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Neighborhood
MF GO:0005547 phosphatidylinositol-3,4,5-trisphosphate binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005773 vacuole IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006090 pyruvate metabolic process IEP Neighborhood
BP GO:0006091 generation of precursor metabolites and energy IEP Neighborhood
BP GO:0006096 glycolytic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006164 purine nucleotide biosynthetic process IEP Neighborhood
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006491 N-glycan processing IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006732 coenzyme metabolic process IEP Neighborhood
BP GO:0006733 oxidoreduction coenzyme metabolic process IEP Neighborhood
BP GO:0006753 nucleoside phosphate metabolic process IEP Neighborhood
BP GO:0006754 ATP biosynthetic process IEP Neighborhood
BP GO:0006757 ATP generation from ADP IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007033 vacuole organization IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0009044 xylan 1,4-beta-xylosidase activity IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009100 glycoprotein metabolic process IEP Neighborhood
BP GO:0009108 coenzyme biosynthetic process IEP Neighborhood
BP GO:0009117 nucleotide metabolic process IEP Neighborhood
BP GO:0009123 nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009132 nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009141 nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009165 nucleotide biosynthetic process IEP Neighborhood
BP GO:0009166 nucleotide catabolic process IEP Neighborhood
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Neighborhood
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Neighborhood
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP Neighborhood
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP Neighborhood
BP GO:0009259 ribonucleotide metabolic process IEP Neighborhood
BP GO:0009260 ribonucleotide biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009757 hexose mediated signaling IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009789 positive regulation of abscisic acid-activated signaling pathway IEP Neighborhood
CC GO:0009925 basal plasma membrane IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010039 response to iron ion IEP Neighborhood
BP GO:0010255 glucose mediated signaling pathway IEP Neighborhood
BP GO:0010350 cellular response to magnesium starvation IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010555 response to mannitol IEP Neighborhood
BP GO:0010639 negative regulation of organelle organization IEP Neighborhood
BP GO:0010647 positive regulation of cell communication IEP Neighborhood
BP GO:0014070 response to organic cyclic compound IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016032 viral process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016262 protein N-acetylglucosaminyltransferase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0018008 N-terminal peptidyl-glycine N-myristoylation IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018201 peptidyl-glycine modification IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Neighborhood
BP GO:0019362 pyridine nucleotide metabolic process IEP Neighborhood
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0019693 ribose phosphate metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0030308 negative regulation of cell growth IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0030834 regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030835 negative regulation of actin filament depolymerization IEP Neighborhood
BP GO:0030837 negative regulation of actin filament polymerization IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031110 regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031111 negative regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031112 positive regulation of microtubule polymerization or depolymerization IEP Neighborhood
BP GO:0031113 regulation of microtubule polymerization IEP Neighborhood
BP GO:0031114 regulation of microtubule depolymerization IEP Neighborhood
BP GO:0031115 negative regulation of microtubule polymerization IEP Neighborhood
BP GO:0031117 positive regulation of microtubule depolymerization IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
BP GO:0031333 negative regulation of protein complex assembly IEP Neighborhood
BP GO:0032026 response to magnesium ion IEP Neighborhood
BP GO:0032271 regulation of protein polymerization IEP Neighborhood
BP GO:0032272 negative regulation of protein polymerization IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0032886 regulation of microtubule-based process IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0035864 response to potassium ion IEP Neighborhood
BP GO:0035865 cellular response to potassium ion IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
BP GO:0042866 pyruvate biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043242 negative regulation of protein complex disassembly IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
BP GO:0043254 regulation of protein complex assembly IEP Neighborhood
MF GO:0043325 phosphatidylinositol-3,4-bisphosphate binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0044403 symbiont process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0044766 multi-organism transport IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045493 xylan catabolic process IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046031 ADP metabolic process IEP Neighborhood
BP GO:0046034 ATP metabolic process IEP Neighborhood
BP GO:0046390 ribose phosphate biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Neighborhood
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Neighborhood
CC GO:0046658 anchored component of plasma membrane IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046688 response to copper ion IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046794 transport of virus IEP Neighborhood
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Neighborhood
BP GO:0046939 nucleotide phosphorylation IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048640 negative regulation of developmental growth IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051017 actin filament bundle assembly IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051129 negative regulation of cellular component organization IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051493 regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051494 negative regulation of cytoskeleton organization IEP Neighborhood
BP GO:0051511 negative regulation of unidimensional cell growth IEP Neighborhood
BP GO:0051592 response to calcium ion IEP Neighborhood
BP GO:0051693 actin filament capping IEP Neighborhood
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0061572 actin filament bundle organization IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0070507 regulation of microtubule cytoskeleton organization IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071216 cellular response to biotic stimulus IEP Neighborhood
BP GO:0071219 cellular response to molecule of bacterial origin IEP Neighborhood
BP GO:0071241 cellular response to inorganic substance IEP Neighborhood
BP GO:0071248 cellular response to metal ion IEP Neighborhood
BP GO:0071280 cellular response to copper ion IEP Neighborhood
BP GO:0071281 cellular response to iron ion IEP Neighborhood
BP GO:0071286 cellular response to magnesium ion IEP Neighborhood
BP GO:0071310 cellular response to organic substance IEP Neighborhood
BP GO:0071322 cellular response to carbohydrate stimulus IEP Neighborhood
BP GO:0071325 cellular response to mannitol stimulus IEP Neighborhood
BP GO:0071470 cellular response to osmotic stress IEP Neighborhood
BP GO:0071472 cellular response to salt stress IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072522 purine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072524 pyridine-containing compound metabolic process IEP Neighborhood
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Neighborhood
BP GO:0072708 response to sorbitol IEP Neighborhood
BP GO:0072709 cellular response to sorbitol IEP Neighborhood
BP GO:0075733 intracellular transport of virus IEP Neighborhood
MF GO:0080025 phosphatidylinositol-3,5-bisphosphate binding IEP Neighborhood
BP GO:0090407 organophosphate biosynthetic process IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
MF GO:0097599 xylanase activity IEP Neighborhood
CC GO:0098590 plasma membrane region IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1901135 carbohydrate derivative metabolic process IEP Neighborhood
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901421 positive regulation of response to alcohol IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1901879 regulation of protein depolymerization IEP Neighborhood
BP GO:1901880 negative regulation of protein depolymerization IEP Neighborhood
BP GO:1901881 positive regulation of protein depolymerization IEP Neighborhood
MF GO:1901981 phosphatidylinositol phosphate binding IEP Neighborhood
BP GO:1902579 multi-organism localization IEP Neighborhood
BP GO:1902903 regulation of supramolecular fiber organization IEP Neighborhood
BP GO:1902904 negative regulation of supramolecular fiber organization IEP Neighborhood
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905959 positive regulation of cellular response to alcohol IEP Neighborhood
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 112 391
No external refs found!