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  5. Mp1g09810.1

Mp1g09810.1


Description : platform ATPase (CDC48)


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0001221 (LandPlants) Phylogenetic Tree(s): OG_05_0001221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g09810.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00198390 evm_27.TU.AmTr_v1... Calmodulin-interacting protein 111 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G53230 No alias ATPase, AAA-type, CDC48 protein 0.02 Archaeplastida
Solyc06g074980.3.1 No alias platform ATPase (CDC48) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
BP GO:0000723 telomere maintenance IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005758 mitochondrial intermembrane space IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016530 metallochaperone activity IEP Neighborhood
MF GO:0016531 copper chaperone activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
CC GO:0031970 organelle envelope lumen IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
BP GO:0032200 telomere organization IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060249 anatomical structure homeostasis IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003338 CDC4_N-term_subdom 30 111
IPR004201 Cdc48_dom2 132 194
IPR015415 Vps4_C 732 764
IPR003959 ATPase_AAA_core 245 374
IPR003959 ATPase_AAA_core 518 651
No external refs found!