AT3G58260


Description : TRAF-like family protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58260
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.04 Archaeplastida
AT1G31380 No alias TRAF-like family protein 0.09 Archaeplastida
AT1G31390 No alias TRAF-like family protein 0.07 Archaeplastida
AT1G31400 No alias TRAF-like family protein 0.05 Archaeplastida
AT2G01790 No alias TRAF-like family protein 0.06 Archaeplastida
AT2G05420 No alias TRAF-like family protein 0.05 Archaeplastida
AT2G42455 No alias No description available 0.1 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.08 Archaeplastida
AT2G42465 No alias No description available 0.08 Archaeplastida
AT3G27040 No alias Meprin and TRAF (MATH) homology domain-containing protein 0.04 Archaeplastida
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.1 Archaeplastida
AT3G44790 No alias TRAF-like family protein 0.05 Archaeplastida
AT3G44805 No alias TRAF-like superfamily protein 0.04 Archaeplastida
AT3G58210 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.03 Archaeplastida
AT3G58320 No alias Ubiquitin-specific protease family C19-related protein 0.04 Archaeplastida
AT3G58330 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.05 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.16 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.1 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 13 137
No external refs found!