1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G58340

AT3G58340


Description : TRAF-like family protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58340
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.04 Archaeplastida
AT1G31390 No alias TRAF-like family protein 0.09 Archaeplastida
AT1G31400 No alias TRAF-like family protein 0.09 Archaeplastida
AT2G01790 No alias TRAF-like family protein 0.07 Archaeplastida
AT2G05410 No alias TRAF-like family protein 0.14 Archaeplastida
AT2G05420 No alias TRAF-like family protein 0.08 Archaeplastida
AT2G42455 No alias No description available 0.13 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.09 Archaeplastida
AT2G42465 No alias No description available 0.07 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.15 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.16 Archaeplastida
AT3G27040 No alias Meprin and TRAF (MATH) homology domain-containing protein 0.06 Archaeplastida
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.12 Archaeplastida
AT3G44790 No alias TRAF-like family protein 0.04 Archaeplastida
AT3G44805 No alias TRAF-like superfamily protein 0.04 Archaeplastida
AT3G58210 No alias TRAF-like family protein 0.02 Archaeplastida
AT3G58230 No alias Ubiquitin-specific protease family C19-related protein 0.05 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.17 Archaeplastida
AT3G58260 No alias TRAF-like family protein 0.16 Archaeplastida
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.03 Archaeplastida
AT3G58300 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.05 Archaeplastida
AT3G58320 No alias Ubiquitin-specific protease family C19-related protein 0.04 Archaeplastida
AT3G58330 No alias Arabidopsis phospholipase-like protein (PEARLI 4) family 0.07 Archaeplastida
AT3G58360 No alias TRAF-like family protein 0.14 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58420 No alias TRAF-like superfamily protein 0.03 Archaeplastida
AT3G58440 No alias TRAF-like superfamily protein 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 13 131
No external refs found!