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  5. AT3G58400

AT3G58400


Description : TRAF-like family protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58400
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.01 Archaeplastida
AT1G31380 No alias TRAF-like family protein 0.05 Archaeplastida
AT1G31390 No alias TRAF-like family protein 0.02 Archaeplastida
AT1G31400 No alias TRAF-like family protein 0.01 Archaeplastida
AT2G01790 No alias TRAF-like family protein 0.01 Archaeplastida
AT2G05410 No alias TRAF-like family protein 0.02 Archaeplastida
AT2G05420 No alias TRAF-like family protein 0.01 Archaeplastida
AT2G42455 No alias No description available 0.02 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.02 Archaeplastida
AT2G42465 No alias No description available 0.02 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.02 Archaeplastida
AT2G42475 No alias No description available 0.02 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.02 Archaeplastida
AT3G27040 No alias Meprin and TRAF (MATH) homology domain-containing protein 0.03 Archaeplastida
AT3G29580 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.02 Archaeplastida
AT3G58230 No alias Ubiquitin-specific protease family C19-related protein 0.01 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.02 Archaeplastida
AT3G58260 No alias TRAF-like family protein 0.02 Archaeplastida
AT3G58290 No alias TRAF-like superfamily protein 0.02 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58360 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.06 Archaeplastida
AT3G58440 No alias TRAF-like superfamily protein 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000741 karyogamy IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0048284 organelle fusion IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 67 151
No external refs found!