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  5. AT3G58420

AT3G58420


Description : TRAF-like superfamily protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58420
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
AT1G31370 No alias Ubiquitin-specific protease family C19-related protein 0.03 Archaeplastida
AT2G42455 No alias No description available 0.04 Archaeplastida
AT3G44790 No alias TRAF-like family protein 0.05 Archaeplastida
AT3G44805 No alias TRAF-like superfamily protein 0.03 Archaeplastida
AT3G58240 No alias TRAF-like superfamily protein 0.04 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.03 Archaeplastida
AT3G58440 No alias TRAF-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
BP GO:0001676 long-chain fatty acid metabolic process IEP Neighborhood
BP GO:0002213 defense response to insect IEP Neighborhood
MF GO:0004638 phosphoribosylaminoimidazole carboxylase activity IEP Neighborhood
MF GO:0005345 purine nucleobase transmembrane transporter activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006189 'de novo' IMP biosynthetic process IEP Neighborhood
BP GO:0006863 purine nucleobase transport IEP Neighborhood
CC GO:0009320 phosphoribosylaminoimidazole carboxylase complex IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
MF GO:0015205 nucleobase transmembrane transporter activity IEP Neighborhood
BP GO:0015851 nucleobase transport IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0045168 cell-cell signaling involved in cell fate commitment IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
BP GO:0048445 carpel morphogenesis IEP Neighborhood
BP GO:0048629 trichome patterning IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!