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AT3G58440


Description : TRAF-like superfamily protein


Gene families : OG0002414 (Archaeplastida) Phylogenetic Tree(s): OG0002414_tree ,
OG_05_0001602 (LandPlants) Phylogenetic Tree(s): OG_05_0001602_tree ,
OG_06_0000866 (SeedPlants) Phylogenetic Tree(s): OG_06_0000866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G58440
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AT1G31380 No alias TRAF-like family protein 0.06 Archaeplastida
AT2G05410 No alias TRAF-like family protein 0.07 Archaeplastida
AT2G42455 No alias No description available 0.07 Archaeplastida
AT2G42460 No alias TRAF-like family protein 0.06 Archaeplastida
AT2G42465 No alias No description available 0.05 Archaeplastida
AT2G42470 No alias TRAF-like family protein 0.07 Archaeplastida
AT2G42475 No alias No description available 0.09 Archaeplastida
AT2G42480 No alias TRAF-like family protein 0.06 Archaeplastida
AT3G44790 No alias TRAF-like family protein 0.08 Archaeplastida
AT3G58210 No alias TRAF-like family protein 0.05 Archaeplastida
AT3G58230 No alias Ubiquitin-specific protease family C19-related protein 0.03 Archaeplastida
AT3G58280 No alias Arabidopsis phospholipase-like protein (PEARLI 4) with... 0.05 Archaeplastida
AT3G58340 No alias TRAF-like family protein 0.1 Archaeplastida
AT3G58370 No alias TRAF-like family protein 0.06 Archaeplastida
AT3G58400 No alias TRAF-like family protein 0.11 Archaeplastida
AT3G58420 No alias TRAF-like superfamily protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006360 transcription by RNA polymerase I IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 16 133
No external refs found!