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  5. Mp1g15660.1

Mp1g15660.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000200 (Archaeplastida) Phylogenetic Tree(s): OG0000200_tree ,
OG_05_0000106 (LandPlants) Phylogenetic Tree(s): OG_05_0000106_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g15660.1
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00120910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00057p00204520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
AMTR_s00059p00106830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01003119001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01016867001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_17209 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Gb_41434 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g39110.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g51590.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g10140.1 No alias C2H2 zinc finger transcription factor. elicitor peptide... 0.03 Archaeplastida
LOC_Os07g39310.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os08g44050.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_10430137g0020 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Pp3c1_20230V3.1 No alias indeterminate(ID)-domain 2 0.02 Archaeplastida
Pp3c5_20980V3.1 No alias C2H2-like zinc finger protein 0.02 Archaeplastida
Solyc06g062670.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc06g072360.3.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc07g053570.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e004751_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e010628_P002 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e016559_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008061 chitin binding IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!