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  5. Mp1g16320.1

Mp1g16320.1


Description : OBERON-like protein OS=Nicotiana benthamiana (sp|q84n38|pvip_nicbe : 322.0)


Gene families : OG0001005 (Archaeplastida) Phylogenetic Tree(s): OG0001005_tree ,
OG_05_0000637 (LandPlants) Phylogenetic Tree(s): OG_05_0000637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp1g16320.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00014560 evm_27.TU.AmTr_v1... Protein OBERON 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00103p00104550 evm_27.TU.AmTr_v1... Protein OBERON 4 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT1G14740 No alias Protein of unknown function (DUF1423) 0.03 Archaeplastida
AT3G07780 OBE1 Protein of unknown function (DUF1423) 0.02 Archaeplastida
AT3G63500 No alias Protein of unknown function (DUF1423) 0.02 Archaeplastida
LOC_Os03g13590.1 No alias no description available(sp|q10pc5|tta1_orysj : 1188.0) 0.04 Archaeplastida
LOC_Os12g32980.1 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.04 Archaeplastida
MA_105216g0010 No alias Protein OBERON 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_82295g0010 No alias no description available(sp|q10pc5|tta1_orysj : 95.1) 0.02 Archaeplastida
Pp3c16_12370V3.1 No alias Protein of unknown function (DUF1423) 0.02 Archaeplastida
Pp3c20_20250V3.1 No alias Protein of unknown function (DUF1423) 0.03 Archaeplastida
Smo158800 No alias OBERON-like protein OS=Nicotiana benthamiana 0.02 Archaeplastida
Solyc01g087490.4.1 No alias Protein OBERON 4 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e000995_P002 No alias no description available(sp|q10pc5|tta1_orysj : 940.0) 0.05 Archaeplastida
Zm00001e011323_P001 No alias OBERON-like protein OS=Nicotiana benthamiana... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032881 Oberon_PHD 669 792
IPR032535 Oberon_cc 891 1012
No external refs found!