AT3G58880

Description : F-box/RNI-like superfamily protein

Gene families : OG0000914 (Archaeplastida) Phylogenetic Tree(s): OG0000914_tree ,
OG_05_0000543 (LandPlants) Phylogenetic Tree(s): OG_05_0000543_tree ,
OG_06_0000263 (SeedPlants) Phylogenetic Tree(s): OG_06_0000263_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G58880
Cluster	HCCA: Cluster_74

Target	Alias	Description	ECC score	Gene Family Method
AT1G48400	No alias	F-box/RNI-like/FBD-like domains-containing protein	0.06	Archaeplastida
AT1G56610	No alias	Protein with RNI-like/FBD-like domains	0.05	Archaeplastida
AT1G64540	No alias	F-box/FBD-like domains containing protein	0.05	Archaeplastida
AT2G29930	No alias	F-box/RNI-like superfamily protein	0.04	Archaeplastida
AT2G42720	No alias	FBD, F-box, Skp2-like and Leucine Rich Repeat domains...	0.07	Archaeplastida
AT3G44060	No alias	F-box/RNI-like superfamily protein	0.04	Archaeplastida
AT3G44080	No alias	F-box family protein	0.07	Archaeplastida
AT3G44090	No alias	F-box family protein	0.05	Archaeplastida
AT3G44180	No alias	syntaxin-related family protein	0.05	Archaeplastida
AT3G54160	No alias	RNI-like superfamily protein	0.07	Archaeplastida
AT3G58920	No alias	F-box/RNI-like superfamily protein	0.05	Archaeplastida
AT3G59160	No alias	F-box/RNI-like superfamily protein	0.07	Archaeplastida
AT4G13960	No alias	F-box/RNI-like superfamily protein	0.04	Archaeplastida
AT5G35926	No alias	Protein with RNI-like/FBD-like domains	0.04	Archaeplastida
AT5G38392	No alias	No description available	0.05	Archaeplastida
AT5G41630	No alias	F-box/RNI-like superfamily protein	0.03	Archaeplastida
AT5G41830	No alias	RNI-like superfamily protein	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004743	pyruvate kinase activity	IEP	Neighborhood
CC	GO:0005737	cytoplasm	IEP	Neighborhood
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013101	Leu-rich_rpt_2	160	185
IPR001810	F-box_dom	6	40

External Links

No external refs found!